ARCHETYPE Specimen Preparation (openEHR-EHR-CLUSTER.specimen_preparation.v1)

Type: openEHR ARCHETYPE
Purpose: To record details of laboratory specimen processing
Use: Generally used within a CLUSTER.specimen archetype.
Misuse: null

Available formats: ADL XML

ARCHETYPE IDopenEHR-EHR-CLUSTER.specimen_preparation.v1
ConceptSpecimen Preparation
DescriptionTo record details of laboratory specimen processing
UseGenerally used within a CLUSTER.specimen archetype.
PurposeTo record details of laboratory specimen processing
ReferencesDigital Imaging and Communications in Medicine (DICOM) Supplement 122: Specimen Module and Revised Pathology SOP Classes DICOM Standards Committee, Working Groups 26, Pathology IHE Anatomic Pathology Technical Framework Volume 1 (PAT TF-1) Revision 1.2 – Trial Implementation November 24, 2008
Copyright© openEHR Foundation
AuthorsAuthor name:
Organisation: NEHTA
Email: clinicalinfo@nehta.gov.au
Date originally authored: 13-Aug-2010
Other Details LanguageAuthor name:
Organisation: NEHTA
Email: clinicalinfo@nehta.gov.au
Date originally authored: 13-Aug-2010
Other Details (Language Independent)
  • References: Digital Imaging and Communications in Medicine (DICOM) Supplement 122: Specimen Module and Revised Pathology SOP Classes DICOM Standards Committee, Working Groups 26, Pathology IHE Anatomic Pathology Technical Framework Volume 1 (PAT TF-1) Revision 1.2 – Trial Implementation November 24, 2008
  • MD5-CAM-1.0.1: 469EFAB49F635E54119CD7B4D140D064
Keywordsspecimen, laboratory, sample, histopathology, histology, pathology
LifecycleApprovedCandidate
UID1.2.36.1.2001.1001.100.106.1.0
Language useden
Citeable Identifier1013.1.358
items
Processing StepProcessing Step: Used to support DICOM Supp 122 compatible specimen processing steps. Describes the single immediate processing step to go from parent to current specimen
Optional[{dc_id=16314, status=Draft, detail_docref=data_groups/NEHTA-16314-Processing_Step-Data_Group.xml, version=1.0}]
DateTime of Processing StepDateTime of Processing Step: The data and time that the processing step occured.
Optional[{dc_id=16315, status=Draft, detail_docref=data_elements/NEHTA-16315-DateTime_of_Processing_Step-Data_Element.xml, version=1.0}]
Parent Specimen IdentifierParent Specimen Identifier: Unique identifier of the parent specimen, where the specimen is split into sub-samples.
Optional[{dc_id=16187, status=Draft, detail_docref=data_elements/NEHTA-16187-Parent_Specimen_Identifier-Data_Element.xml, version=1.0}]
Processing Step TypeProcessing Step Type: A DICOM compatible code describing a single processing step.
Optional[{dc_id=16317, status=Draft, detail_docref=data_elements/NEHTA-16317-Processing_Step_Type-Data_Element.xml, version=1.0}]
  • Specimen collection [*]
  • Specimen receiving [*]
  • Sampling of tussue specimen [*]
  • Staining [*]
  • Specimen processing [*]
  • Specimen storage [*]
Specimen Processing TypeSpecimen Processing Type: A physical process applied to the specimen e.g. block embedding
Optional[{dc_id=16318, status=Draft, detail_docref=data_elements/NEHTA-16318-Specimen_Processing_Type-Data_Element.xml, version=1.0}]
DescriptionDescription: A general description of the specimen prepartion.
Optional[{dc_id=16319, status=Draft, detail_docref=data_elements/NEHTA-16319-Description-Data_Element.xml, version=1.0}]
Specific PreparationSpecific Preparation: Details of the specific preparation carried out during a single processing step.
Optional[{dc_id=16320, status=Draft, detail_docref=data_groups/NEHTA-16320-Specific_Preparation-Data_Group.xml, version=1.0}]
Sampling MethodSampling Method: The sampling method used. e.g dissection, block sampling
Optional[{dc_id=16321, status=Draft, detail_docref=data_elements/NEHTA-16321-Sampling_Method-Data_Element.xml, version=1.0}]
Staining MethodStaining Method: Stain used for a microscopy slide.
Optional[{dc_id=16322, status=Draft, detail_docref=data_elements/NEHTA-16322-Staining_Method-Data_Element.xml, version=1.0}]
Embedding MediumEmbedding Medium: The medium within which the specimen is embedded e.g paraffin
Optional[{dc_id=16323, status=Draft, detail_docref=data_elements/NEHTA-16323-Embedding_Medium-Data_Element.xml, version=1.0}]
FixativeFixative: The fixative used
Optional[{dc_id=16324, status=Draft, detail_docref=data_elements/NEHTA-16324-Fixative-Data_Element.xml, version=1.0}]
Other contributorsDr Ian McNicoll
Sam Heard Ocean Informatics
Heather Leslie Ocean Informatics
Koray Atalag University of Auckland
Eric Browne
Stephen Chu
Eleanor Royle
Ning Pan
Robert L'egan
Don Stewart
Stephen Royce
Translators